Merge: Testing and CI/CD infrastructure (Agent 5) - resolved conflicts

.github/workflows/ci.yml

@@ -1,10 +1,13 @@
 # LocalGreenChain CI Pipeline
-# Agent 4: Production Deployment
+# Combined: Agent 4 (Production Deployment) + Agent 5 (Testing)
 #
 # Runs on every push and pull request:
-# - Linting and type checking
+# - Linting, formatting, and type checking
 # - Unit and integration tests
+# - E2E tests with Cypress
 # - Build verification
+# - Docker build (main branch only)
+# - Security scanning
 
 name: CI
 
@@ -20,19 +23,18 @@ concurrency:
 
 env:
   NODE_ENV: test
+  NODE_VERSION: '18'
 
 jobs:
   # ==========================================================================
   # Lint and Type Check
   # ==========================================================================
   lint:
-    name: Lint & Type Check
+    name: Lint & Format
     runs-on: ubuntu-latest
     timeout-minutes: 10
-
     steps:
-      - name: Checkout code
-        uses: actions/checkout@v4
+      - uses: actions/checkout@v4
 
       - name: Setup Bun
         uses: oven-sh/setup-bun@v1
@@ -45,20 +47,36 @@ jobs:
       - name: Run ESLint
         run: bun run lint
 
-      - name: Run TypeScript type check
-        run: bunx tsc --noEmit
+      - name: Check formatting
+        run: bun run format:check
+
+  type-check:
+    name: Type Check
+    runs-on: ubuntu-latest
+    timeout-minutes: 10
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Setup Bun
+        uses: oven-sh/setup-bun@v1
+        with:
+          bun-version: latest
+
+      - name: Install dependencies
+        run: bun install --frozen-lockfile
+
+      - name: Run TypeScript type checking
+        run: bun run type-check
 
   # ==========================================================================
   # Unit Tests
   # ==========================================================================
   test:
-    name: Unit Tests
+    name: Unit & Integration Tests
     runs-on: ubuntu-latest
     timeout-minutes: 15
-
     steps:
-      - name: Checkout code
-        uses: actions/checkout@v4
+      - uses: actions/checkout@v4
 
       - name: Setup Bun
         uses: oven-sh/setup-bun@v1
@@ -69,15 +87,17 @@ jobs:
         run: bun install --frozen-lockfile
 
       - name: Run tests with coverage
-        run: bun run test:coverage
+        run: bun run test:ci
 
-      - name: Upload coverage reports
-        uses: codecov/codecov-action@v3
+      - name: Upload test results
+        uses: actions/upload-artifact@v4
         if: always()
         with:
-          files: ./coverage/lcov.info
-          fail_ci_if_error: false
-          verbose: true
+          name: test-results
+          path: |
+            coverage/
+            junit.xml
+          retention-days: 30
 
   # ==========================================================================
   # Build
@@ -86,11 +106,9 @@ jobs:
     name: Build
     runs-on: ubuntu-latest
     timeout-minutes: 15
-    needs: [lint, test]
-
+    needs: [lint, type-check, test]
     steps:
-      - name: Checkout code
-        uses: actions/checkout@v4
+      - uses: actions/checkout@v4
 
       - name: Setup Bun
         uses: oven-sh/setup-bun@v1
@@ -112,6 +130,56 @@ jobs:
           path: .next/
           retention-days: 7
 
+  # ==========================================================================
+  # E2E Tests
+  # ==========================================================================
+  e2e:
+    name: E2E Tests
+    runs-on: ubuntu-latest
+    timeout-minutes: 20
+    needs: build
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Setup Bun
+        uses: oven-sh/setup-bun@v1
+        with:
+          bun-version: latest
+
+      - name: Install dependencies
+        run: bun install --frozen-lockfile
+
+      - name: Download build artifacts
+        uses: actions/download-artifact@v4
+        with:
+          name: build-output
+          path: .next/
+
+      - name: Run Cypress tests
+        uses: cypress-io/github-action@v6
+        with:
+          start: bun run start
+          wait-on: 'http://localhost:3001'
+          wait-on-timeout: 120
+          browser: chrome
+          record: false
+
+      - name: Upload Cypress screenshots
+        uses: actions/upload-artifact@v4
+        if: failure()
+        with:
+          name: cypress-screenshots
+          path: cypress/screenshots
+          retention-days: 7
+
+      - name: Upload Cypress videos
+        uses: actions/upload-artifact@v4
+        if: failure()
+        with:
+          name: cypress-videos
+          path: cypress/videos
+          retention-days: 7
+
   # ==========================================================================
   # Docker Build (only on main branch)
   # ==========================================================================
@@ -121,10 +189,8 @@ jobs:
     timeout-minutes: 20
     needs: [build]
     if: github.ref == 'refs/heads/main'
-
     steps:
-      - name: Checkout code
-        uses: actions/checkout@v4
+      - uses: actions/checkout@v4
 
       - name: Set up Docker Buildx
         uses: docker/setup-buildx-action@v3
@@ -146,10 +212,8 @@ jobs:
     runs-on: ubuntu-latest
     timeout-minutes: 10
     needs: [lint]
-
     steps:
-      - name: Checkout code
-        uses: actions/checkout@v4
+      - uses: actions/checkout@v4
 
       - name: Setup Bun
         uses: oven-sh/setup-bun@v1

.husky/_/husky.sh

@@ -0,0 +1,36 @@
+#!/usr/bin/env sh
+if [ -z "$husky_skip_init" ]; then
+  debug () {
+    if [ "$HUSKY_DEBUG" = "1" ]; then
+      echo "husky (debug) - $1"
+    fi
+  }
+
+  readonly hook_name="$(basename -- "$0")"
+  debug "starting $hook_name..."
+
+  if [ "$HUSKY" = "0" ]; then
+    debug "HUSKY env variable is set to 0, skipping hook"
+    exit 0
+  fi
+
+  if [ -f ~/.huskyrc ]; then
+    debug "sourcing ~/.huskyrc"
+    . ~/.huskyrc
+  fi
+
+  readonly husky_skip_init=1
+  export husky_skip_init
+  sh -e "$0" "$@"
+  exitCode="$?"
+
+  if [ $exitCode != 0 ]; then
+    echo "husky - $hook_name hook exited with code $exitCode (error)"
+  fi
+
+  if [ $exitCode = 127 ]; then
+    echo "husky - command not found in PATH=$PATH"
+  fi
+
+  exit $exitCode
+fi

.husky/commit-msg

@@ -0,0 +1,4 @@
+#!/usr/bin/env sh
+. "$(dirname -- "$0")/_/husky.sh"
+
+npx --no -- commitlint --edit ${1}

.husky/pre-commit

@@ -0,0 +1,4 @@
+#!/usr/bin/env sh
+. "$(dirname -- "$0")/_/husky.sh"
+
+npx lint-staged

.prettierignore

@@ -0,0 +1,10 @@
+node_modules/
+.next/
+out/
+coverage/
+.git/
+*.min.js
+*.min.css
+bun.lockb
+package-lock.json
+yarn.lock

.prettierrc

@@ -0,0 +1,11 @@
+{
+  "semi": true,
+  "singleQuote": true,
+  "trailingComma": "es5",
+  "tabWidth": 2,
+  "useTabs": false,
+  "printWidth": 100,
+  "bracketSpacing": true,
+  "arrowParens": "always",
+  "endOfLine": "lf"
+}

__tests__/api/plants.test.ts

@@ -0,0 +1,180 @@
+/**
+ * Plants API Tests
+ * Integration tests for plant-related API endpoints
+ */
+
+// Mock the blockchain manager
+jest.mock('../../lib/blockchain/manager', () => ({
+  getBlockchain: jest.fn(() => ({
+    getChain: jest.fn(() => [
+      // Genesis block
+      {
+        index: 0,
+        timestamp: '2024-01-01T00:00:00Z',
+        plant: { id: 'genesis' },
+        previousHash: '0',
+        hash: 'genesis-hash',
+        nonce: 0,
+      },
+      // Test plants
+      {
+        index: 1,
+        timestamp: '2024-01-02T00:00:00Z',
+        plant: {
+          id: 'plant-1',
+          name: 'Cherry Tomato',
+          species: 'Tomato',
+          variety: 'Cherry',
+          generation: 1,
+          propagationType: 'original',
+          status: 'healthy',
+          location: { latitude: 40.7128, longitude: -74.006 },
+        },
+        previousHash: 'genesis-hash',
+        hash: 'hash-1',
+        nonce: 1,
+      },
+      {
+        index: 2,
+        timestamp: '2024-01-03T00:00:00Z',
+        plant: {
+          id: 'plant-2',
+          name: 'Sweet Basil',
+          species: 'Basil',
+          variety: 'Genovese',
+          generation: 1,
+          propagationType: 'seed',
+          parentPlantId: 'plant-1',
+          status: 'thriving',
+          location: { latitude: 40.7228, longitude: -74.016 },
+        },
+        previousHash: 'hash-1',
+        hash: 'hash-2',
+        nonce: 2,
+      },
+    ]),
+    addPlant: jest.fn((plant) => ({
+      index: 3,
+      timestamp: new Date().toISOString(),
+      plant,
+      previousHash: 'hash-2',
+      hash: 'hash-3',
+      nonce: 3,
+    })),
+    findPlant: jest.fn((id) => {
+      if (id === 'plant-1') {
+        return {
+          index: 1,
+          plant: {
+            id: 'plant-1',
+            name: 'Cherry Tomato',
+            species: 'Tomato',
+            variety: 'Cherry',
+            generation: 1,
+            status: 'healthy',
+          },
+        };
+      }
+      return undefined;
+    }),
+    isValid: jest.fn(() => true),
+  })),
+}));
+
+describe('Plants API', () => {
+  describe('GET /api/plants', () => {
+    it('should return plant list', async () => {
+      const { getBlockchain } = require('../../lib/blockchain/manager');
+      const blockchain = getBlockchain();
+      const chain = blockchain.getChain();
+
+      expect(chain.length).toBeGreaterThan(1);
+      expect(chain[1].plant.name).toBe('Cherry Tomato');
+    });
+  });
+
+  describe('GET /api/plants/[id]', () => {
+    it('should return plant by ID', async () => {
+      const { getBlockchain } = require('../../lib/blockchain/manager');
+      const blockchain = getBlockchain();
+      const plant = blockchain.findPlant('plant-1');
+
+      expect(plant).toBeDefined();
+      expect(plant.plant.name).toBe('Cherry Tomato');
+    });
+
+    it('should return undefined for non-existent plant', async () => {
+      const { getBlockchain } = require('../../lib/blockchain/manager');
+      const blockchain = getBlockchain();
+      const plant = blockchain.findPlant('non-existent');
+
+      expect(plant).toBeUndefined();
+    });
+  });
+
+  describe('POST /api/plants/register', () => {
+    it('should register new plant', async () => {
+      const { getBlockchain } = require('../../lib/blockchain/manager');
+      const blockchain = getBlockchain();
+
+      const newPlant = {
+        id: 'plant-3',
+        name: 'New Plant',
+        species: 'Test',
+        variety: 'Test',
+        generation: 1,
+        propagationType: 'seed',
+        status: 'healthy',
+        location: { latitude: 40.7, longitude: -74.0 },
+      };
+
+      const block = blockchain.addPlant(newPlant);
+
+      expect(block).toBeDefined();
+      expect(block.plant.name).toBe('New Plant');
+      expect(blockchain.addPlant).toHaveBeenCalledWith(newPlant);
+    });
+  });
+
+  describe('GET /api/plants/network', () => {
+    it('should return network statistics', async () => {
+      const { getBlockchain } = require('../../lib/blockchain/manager');
+      const blockchain = getBlockchain();
+      const chain = blockchain.getChain();
+
+      // Calculate network stats
+      const plants = chain.slice(1); // Skip genesis
+      const totalPlants = plants.length;
+      const speciesCounts: Record<string, number> = {};
+
+      plants.forEach((block: any) => {
+        const species = block.plant.species;
+        speciesCounts[species] = (speciesCounts[species] || 0) + 1;
+      });
+
+      expect(totalPlants).toBe(2);
+      expect(speciesCounts['Tomato']).toBe(1);
+      expect(speciesCounts['Basil']).toBe(1);
+    });
+  });
+
+  describe('GET /api/plants/lineage/[id]', () => {
+    it('should return lineage for plant with parent', async () => {
+      const { getBlockchain } = require('../../lib/blockchain/manager');
+      const blockchain = getBlockchain();
+      const chain = blockchain.getChain();
+
+      const plant2 = chain[2].plant;
+      expect(plant2.parentPlantId).toBe('plant-1');
+    });
+  });
+
+  describe('Blockchain Validation', () => {
+    it('should validate chain integrity', async () => {
+      const { getBlockchain } = require('../../lib/blockchain/manager');
+      const blockchain = getBlockchain();
+
+      expect(blockchain.isValid()).toBe(true);
+    });
+  });
+});

__tests__/setup.ts

@@ -0,0 +1,48 @@
+/**
+ * Jest Test Setup
+ * Global configuration and utilities for all tests
+ */
+
+// Extend Jest matchers if needed
+// import '@testing-library/jest-dom';
+
+// Mock console methods to reduce noise in tests
+const originalConsole = { ...console };
+
+beforeAll(() => {
+  // Suppress console.log during tests unless DEBUG is set
+  if (!process.env.DEBUG) {
+    console.log = jest.fn();
+    console.info = jest.fn();
+  }
+});
+
+afterAll(() => {
+  // Restore console
+  console.log = originalConsole.log;
+  console.info = originalConsole.info;
+});
+
+// Global timeout for async operations
+jest.setTimeout(10000);
+
+// Clean up after each test
+afterEach(() => {
+  jest.clearAllMocks();
+});
+
+// Utility function for creating mock dates
+export function mockDate(date: Date | string): void {
+  const mockDateValue = new Date(date);
+  jest.spyOn(global, 'Date').mockImplementation(() => mockDateValue as any);
+}
+
+// Utility function for waiting in tests
+export function wait(ms: number): Promise<void> {
+  return new Promise((resolve) => setTimeout(resolve, ms));
+}
+
+// Utility to create test IDs
+export function createTestId(prefix: string): string {
+  return `${prefix}-${Date.now()}-${Math.random().toString(36).substr(2, 9)}`;
+}

__tests__/unit/agents/AgentOrchestrator.test.ts

@@ -0,0 +1,317 @@
+/**
+ * AgentOrchestrator Tests
+ * Tests for the agent orchestration system
+ */
+
+import { AgentOrchestrator, getOrchestrator } from '../../../lib/agents/AgentOrchestrator';
+
+// Mock all agents
+jest.mock('../../../lib/agents/PlantLineageAgent', () => ({
+  PlantLineageAgent: jest.fn().mockImplementation(() => ({
+    config: { id: 'plant-lineage-agent', name: 'Plant Lineage Agent', priority: 'high' },
+    status: 'idle',
+    start: jest.fn().mockResolvedValue(undefined),
+    stop: jest.fn().mockResolvedValue(undefined),
+    getMetrics: jest.fn().mockReturnValue({
+      agentId: 'plant-lineage-agent',
+      tasksCompleted: 5,
+      tasksFailed: 0,
+      averageExecutionMs: 100,
+      errors: [],
+    }),
+    getAlerts: jest.fn().mockReturnValue([]),
+  })),
+  getPlantLineageAgent: jest.fn(),
+}));
+
+jest.mock('../../../lib/agents/TransportTrackerAgent', () => ({
+  TransportTrackerAgent: jest.fn().mockImplementation(() => ({
+    config: { id: 'transport-tracker-agent', name: 'Transport Tracker Agent', priority: 'high' },
+    status: 'idle',
+    start: jest.fn().mockResolvedValue(undefined),
+    stop: jest.fn().mockResolvedValue(undefined),
+    getMetrics: jest.fn().mockReturnValue({
+      agentId: 'transport-tracker-agent',
+      tasksCompleted: 3,
+      tasksFailed: 1,
+      averageExecutionMs: 150,
+      errors: [],
+    }),
+    getAlerts: jest.fn().mockReturnValue([]),
+  })),
+  getTransportTrackerAgent: jest.fn(),
+}));
+
+jest.mock('../../../lib/agents/DemandForecastAgent', () => ({
+  DemandForecastAgent: jest.fn().mockImplementation(() => ({
+    config: { id: 'demand-forecast-agent', name: 'Demand Forecast Agent', priority: 'high' },
+    status: 'idle',
+    start: jest.fn().mockResolvedValue(undefined),
+    stop: jest.fn().mockResolvedValue(undefined),
+    getMetrics: jest.fn().mockReturnValue({
+      agentId: 'demand-forecast-agent',
+      tasksCompleted: 2,
+      tasksFailed: 0,
+      averageExecutionMs: 200,
+      errors: [],
+    }),
+    getAlerts: jest.fn().mockReturnValue([]),
+  })),
+  getDemandForecastAgent: jest.fn(),
+}));
+
+jest.mock('../../../lib/agents/VerticalFarmAgent', () => ({
+  VerticalFarmAgent: jest.fn().mockImplementation(() => ({
+    config: { id: 'vertical-farm-agent', name: 'Vertical Farm Agent', priority: 'critical' },
+    status: 'idle',
+    start: jest.fn().mockResolvedValue(undefined),
+    stop: jest.fn().mockResolvedValue(undefined),
+    getMetrics: jest.fn().mockReturnValue({
+      agentId: 'vertical-farm-agent',
+      tasksCompleted: 10,
+      tasksFailed: 0,
+      averageExecutionMs: 50,
+      errors: [],
+    }),
+    getAlerts: jest.fn().mockReturnValue([]),
+  })),
+  getVerticalFarmAgent: jest.fn(),
+}));
+
+jest.mock('../../../lib/agents/EnvironmentAnalysisAgent', () => ({
+  EnvironmentAnalysisAgent: jest.fn().mockImplementation(() => ({
+    config: { id: 'environment-analysis-agent', name: 'Environment Analysis Agent', priority: 'medium' },
+    status: 'idle',
+    start: jest.fn().mockResolvedValue(undefined),
+    stop: jest.fn().mockResolvedValue(undefined),
+    getMetrics: jest.fn().mockReturnValue({
+      agentId: 'environment-analysis-agent',
+      tasksCompleted: 1,
+      tasksFailed: 0,
+      averageExecutionMs: 300,
+      errors: [],
+    }),
+    getAlerts: jest.fn().mockReturnValue([]),
+  })),
+  getEnvironmentAnalysisAgent: jest.fn(),
+}));
+
+jest.mock('../../../lib/agents/MarketMatchingAgent', () => ({
+  MarketMatchingAgent: jest.fn().mockImplementation(() => ({
+    config: { id: 'market-matching-agent', name: 'Market Matching Agent', priority: 'high' },
+    status: 'idle',
+    start: jest.fn().mockResolvedValue(undefined),
+    stop: jest.fn().mockResolvedValue(undefined),
+    getMetrics: jest.fn().mockReturnValue({
+      agentId: 'market-matching-agent',
+      tasksCompleted: 4,
+      tasksFailed: 0,
+      averageExecutionMs: 120,
+      errors: [],
+    }),
+    getAlerts: jest.fn().mockReturnValue([]),
+  })),
+  getMarketMatchingAgent: jest.fn(),
+}));
+
+jest.mock('../../../lib/agents/SustainabilityAgent', () => ({
+  SustainabilityAgent: jest.fn().mockImplementation(() => ({
+    config: { id: 'sustainability-agent', name: 'Sustainability Agent', priority: 'medium' },
+    status: 'idle',
+    start: jest.fn().mockResolvedValue(undefined),
+    stop: jest.fn().mockResolvedValue(undefined),
+    getMetrics: jest.fn().mockReturnValue({
+      agentId: 'sustainability-agent',
+      tasksCompleted: 1,
+      tasksFailed: 0,
+      averageExecutionMs: 400,
+      errors: [],
+    }),
+    getAlerts: jest.fn().mockReturnValue([]),
+  })),
+  getSustainabilityAgent: jest.fn(),
+}));
+
+jest.mock('../../../lib/agents/NetworkDiscoveryAgent', () => ({
+  NetworkDiscoveryAgent: jest.fn().mockImplementation(() => ({
+    config: { id: 'network-discovery-agent', name: 'Network Discovery Agent', priority: 'medium' },
+    status: 'idle',
+    start: jest.fn().mockResolvedValue(undefined),
+    stop: jest.fn().mockResolvedValue(undefined),
+    getMetrics: jest.fn().mockReturnValue({
+      agentId: 'network-discovery-agent',
+      tasksCompleted: 1,
+      tasksFailed: 0,
+      averageExecutionMs: 500,
+      errors: [],
+    }),
+    getAlerts: jest.fn().mockReturnValue([]),
+  })),
+  getNetworkDiscoveryAgent: jest.fn(),
+}));
+
+jest.mock('../../../lib/agents/QualityAssuranceAgent', () => ({
+  QualityAssuranceAgent: jest.fn().mockImplementation(() => ({
+    config: { id: 'quality-assurance-agent', name: 'Quality Assurance Agent', priority: 'critical' },
+    status: 'idle',
+    start: jest.fn().mockResolvedValue(undefined),
+    stop: jest.fn().mockResolvedValue(undefined),
+    getMetrics: jest.fn().mockReturnValue({
+      agentId: 'quality-assurance-agent',
+      tasksCompleted: 8,
+      tasksFailed: 0,
+      averageExecutionMs: 80,
+      errors: [],
+    }),
+    getAlerts: jest.fn().mockReturnValue([]),
+  })),
+  getQualityAssuranceAgent: jest.fn(),
+}));
+
+jest.mock('../../../lib/agents/GrowerAdvisoryAgent', () => ({
+  GrowerAdvisoryAgent: jest.fn().mockImplementation(() => ({
+    config: { id: 'grower-advisory-agent', name: 'Grower Advisory Agent', priority: 'high' },
+    status: 'idle',
+    start: jest.fn().mockResolvedValue(undefined),
+    stop: jest.fn().mockResolvedValue(undefined),
+    getMetrics: jest.fn().mockReturnValue({
+      agentId: 'grower-advisory-agent',
+      tasksCompleted: 6,
+      tasksFailed: 1,
+      averageExecutionMs: 180,
+      errors: [],
+    }),
+    getAlerts: jest.fn().mockReturnValue([]),
+  })),
+  getGrowerAdvisoryAgent: jest.fn(),
+}));
+
+describe('AgentOrchestrator', () => {
+  let orchestrator: AgentOrchestrator;
+
+  beforeEach(() => {
+    // Reset singleton
+    (globalThis as any).__orchestratorInstance = undefined;
+    orchestrator = new AgentOrchestrator();
+  });
+
+  afterEach(async () => {
+    const status = orchestrator.getStatus();
+    if (status.isRunning) {
+      await orchestrator.stopAll();
+    }
+  });
+
+  describe('Initialization', () => {
+    it('should initialize with all 10 agents', () => {
+      const status = orchestrator.getStatus();
+      expect(status.totalAgents).toBe(10);
+    });
+
+    it('should not be running initially', () => {
+      const status = orchestrator.getStatus();
+      expect(status.isRunning).toBe(false);
+    });
+
+    it('should have no running agents initially', () => {
+      const status = orchestrator.getStatus();
+      expect(status.runningAgents).toBe(0);
+    });
+  });
+
+  describe('Starting Agents', () => {
+    it('should start all agents', async () => {
+      await orchestrator.startAll();
+      const status = orchestrator.getStatus();
+      expect(status.isRunning).toBe(true);
+    });
+
+    it('should start individual agent', async () => {
+      await orchestrator.startAgent('plant-lineage-agent');
+      const health = orchestrator.getAgentHealth('plant-lineage-agent');
+      expect(health).toBeDefined();
+    });
+  });
+
+  describe('Stopping Agents', () => {
+    it('should stop all agents', async () => {
+      await orchestrator.startAll();
+      await orchestrator.stopAll();
+      const status = orchestrator.getStatus();
+      expect(status.isRunning).toBe(false);
+    });
+
+    it('should stop individual agent', async () => {
+      await orchestrator.startAgent('plant-lineage-agent');
+      await orchestrator.stopAgent('plant-lineage-agent');
+      // Agent should be stopped
+    });
+  });
+
+  describe('Agent Health', () => {
+    it('should return health for existing agent', async () => {
+      await orchestrator.startAll();
+      const health = orchestrator.getAgentHealth('plant-lineage-agent');
+      expect(health).toHaveProperty('agentId');
+      expect(health?.agentId).toBe('plant-lineage-agent');
+    });
+
+    it('should return undefined for non-existent agent', () => {
+      const health = orchestrator.getAgentHealth('non-existent-agent');
+      expect(health).toBeUndefined();
+    });
+  });
+
+  describe('Status', () => {
+    it('should return correct status structure', () => {
+      const status = orchestrator.getStatus();
+      expect(status).toHaveProperty('isRunning');
+      expect(status).toHaveProperty('totalAgents');
+      expect(status).toHaveProperty('runningAgents');
+      expect(status).toHaveProperty('healthyAgents');
+    });
+
+    it('should track uptime when running', async () => {
+      await orchestrator.startAll();
+      await new Promise((resolve) => setTimeout(resolve, 50));
+      const status = orchestrator.getStatus();
+      expect(status.uptime).toBeGreaterThan(0);
+    });
+  });
+
+  describe('Dashboard', () => {
+    it('should return dashboard data', async () => {
+      await orchestrator.startAll();
+      const dashboard = orchestrator.getDashboard();
+      expect(dashboard).toHaveProperty('status');
+      expect(dashboard).toHaveProperty('agents');
+      expect(dashboard).toHaveProperty('recentAlerts');
+    });
+
+    it('should include all agents in dashboard', async () => {
+      await orchestrator.startAll();
+      const dashboard = orchestrator.getDashboard();
+      expect(dashboard.agents.length).toBe(10);
+    });
+  });
+
+  describe('Alerts', () => {
+    it('should return empty alerts initially', () => {
+      const alerts = orchestrator.getAlerts();
+      expect(alerts).toEqual([]);
+    });
+
+    it('should filter alerts by severity', () => {
+      const criticalAlerts = orchestrator.getAlerts('critical');
+      expect(Array.isArray(criticalAlerts)).toBe(true);
+    });
+  });
+
+  describe('Singleton', () => {
+    it('should return same instance from getOrchestrator', () => {
+      const orch1 = getOrchestrator();
+      const orch2 = getOrchestrator();
+      expect(orch1).toBe(orch2);
+    });
+  });
+});

__tests__/unit/agents/BaseAgent.test.ts

@@ -0,0 +1,268 @@
+/**
+ * BaseAgent Tests
+ * Tests for the abstract base agent class
+ */
+
+import { BaseAgent } from '../../../lib/agents/BaseAgent';
+import { AgentConfig, AgentTask, AgentStatus } from '../../../lib/agents/types';
+
+// Concrete implementation for testing
+class TestAgent extends BaseAgent {
+  public runOnceResult: AgentTask | null = null;
+  public runOnceError: Error | null = null;
+  public runOnceCallCount = 0;
+
+  constructor(config?: Partial<AgentConfig>) {
+    super({
+      id: 'test-agent',
+      name: 'Test Agent',
+      description: 'Agent for testing',
+      enabled: true,
+      intervalMs: 100,
+      priority: 'medium',
+      maxRetries: 3,
+      timeoutMs: 5000,
+      ...config,
+    });
+  }
+
+  async runOnce(): Promise<AgentTask | null> {
+    this.runOnceCallCount++;
+    if (this.runOnceError) {
+      throw this.runOnceError;
+    }
+    return this.runOnceResult;
+  }
+
+  // Expose protected methods for testing
+  public testCreateAlert(
+    severity: 'info' | 'warning' | 'error' | 'critical',
+    title: string,
+    message: string
+  ) {
+    return this.createAlert(severity, title, message);
+  }
+
+  public testHandleError(error: Error) {
+    return this.handleError(error);
+  }
+
+  public testAddTask(type: string, payload: Record<string, any>) {
+    return this.addTask(type, payload);
+  }
+
+  public testCreateTaskResult(
+    type: string,
+    status: 'completed' | 'failed',
+    result?: any
+  ) {
+    return this.createTaskResult(type, status, result);
+  }
+}
+
+describe('BaseAgent', () => {
+  let agent: TestAgent;
+
+  beforeEach(() => {
+    agent = new TestAgent();
+    jest.clearAllMocks();
+  });
+
+  afterEach(async () => {
+    if (agent.status === 'running') {
+      await agent.stop();
+    }
+  });
+
+  describe('Initialization', () => {
+    it('should initialize with correct config', () => {
+      expect(agent.config.id).toBe('test-agent');
+      expect(agent.config.name).toBe('Test Agent');
+      expect(agent.config.enabled).toBe(true);
+    });
+
+    it('should initialize with idle status', () => {
+      expect(agent.status).toBe('idle');
+    });
+
+    it('should initialize with empty metrics', () => {
+      const metrics = agent.getMetrics();
+      expect(metrics.tasksCompleted).toBe(0);
+      expect(metrics.tasksFailed).toBe(0);
+      expect(metrics.averageExecutionMs).toBe(0);
+      expect(metrics.errors).toEqual([]);
+    });
+
+    it('should initialize with empty alerts', () => {
+      expect(agent.getAlerts()).toEqual([]);
+    });
+  });
+
+  describe('Lifecycle', () => {
+    it('should start and update status to running', async () => {
+      agent.runOnceResult = agent.testCreateTaskResult('test', 'completed');
+      await agent.start();
+      expect(agent.status).toBe('running');
+    });
+
+    it('should not start twice', async () => {
+      agent.runOnceResult = agent.testCreateTaskResult('test', 'completed');
+      await agent.start();
+      const firstCallCount = agent.runOnceCallCount;
+      await agent.start(); // Second call
+      expect(agent.runOnceCallCount).toBe(firstCallCount);
+    });
+
+    it('should stop and update status to idle', async () => {
+      agent.runOnceResult = agent.testCreateTaskResult('test', 'completed');
+      await agent.start();
+      await agent.stop();
+      expect(agent.status).toBe('idle');
+    });
+
+    it('should pause and resume', async () => {
+      agent.runOnceResult = agent.testCreateTaskResult('test', 'completed');
+      await agent.start();
+      agent.pause();
+      expect(agent.status).toBe('paused');
+      agent.resume();
+      expect(agent.status).toBe('running');
+    });
+
+    it('should not pause if not running', () => {
+      agent.pause();
+      expect(agent.status).toBe('idle');
+    });
+
+    it('should not resume if not paused', () => {
+      agent.resume();
+      expect(agent.status).toBe('idle');
+    });
+  });
+
+  describe('Task Execution', () => {
+    it('should run task on start', async () => {
+      agent.runOnceResult = agent.testCreateTaskResult('test', 'completed');
+      await agent.start();
+      expect(agent.runOnceCallCount).toBe(1);
+      await agent.stop();
+    });
+
+    it('should increment tasksCompleted on success', async () => {
+      agent.runOnceResult = agent.testCreateTaskResult('test', 'completed', { data: 'test' });
+      await agent.start();
+      await agent.stop();
+      expect(agent.getMetrics().tasksCompleted).toBe(1);
+    });
+
+    it('should increment tasksFailed on failure', async () => {
+      agent.runOnceResult = agent.testCreateTaskResult('test', 'failed', null);
+      await agent.start();
+      await agent.stop();
+      expect(agent.getMetrics().tasksFailed).toBe(1);
+    });
+
+    it('should update lastRunAt after execution', async () => {
+      agent.runOnceResult = agent.testCreateTaskResult('test', 'completed');
+      await agent.start();
+      await agent.stop();
+      expect(agent.getMetrics().lastRunAt).not.toBeNull();
+    });
+  });
+
+  describe('Error Handling', () => {
+    it('should handle thrown errors', async () => {
+      agent.runOnceError = new Error('Test error');
+      await agent.start();
+      await agent.stop();
+      const metrics = agent.getMetrics();
+      expect(metrics.errors.length).toBe(1);
+      expect(metrics.errors[0].message).toBe('Test error');
+    });
+
+    it('should record error timestamp', async () => {
+      agent.testHandleError(new Error('Test error'));
+      const metrics = agent.getMetrics();
+      expect(metrics.lastErrorAt).not.toBeNull();
+    });
+
+    it('should limit errors to 50', () => {
+      for (let i = 0; i < 60; i++) {
+        agent.testHandleError(new Error(`Error ${i}`));
+      }
+      expect(agent.getMetrics().errors.length).toBe(50);
+    });
+  });
+
+  describe('Alerts', () => {
+    it('should create alerts with correct structure', () => {
+      const alert = agent.testCreateAlert('warning', 'Test Alert', 'Test message');
+      expect(alert.id).toBeDefined();
+      expect(alert.severity).toBe('warning');
+      expect(alert.title).toBe('Test Alert');
+      expect(alert.message).toBe('Test message');
+      expect(alert.acknowledged).toBe(false);
+    });
+
+    it('should add alerts to the list', () => {
+      agent.testCreateAlert('info', 'Alert 1', 'Message 1');
+      agent.testCreateAlert('warning', 'Alert 2', 'Message 2');
+      expect(agent.getAlerts().length).toBe(2);
+    });
+
+    it('should limit alerts to 100', () => {
+      for (let i = 0; i < 110; i++) {
+        agent.testCreateAlert('info', `Alert ${i}`, 'Message');
+      }
+      expect(agent.getAlerts().length).toBe(100);
+    });
+  });
+
+  describe('Metrics', () => {
+    it('should calculate uptime when running', async () => {
+      agent.runOnceResult = agent.testCreateTaskResult('test', 'completed');
+      await agent.start();
+      await new Promise((resolve) => setTimeout(resolve, 50));
+      const metrics = agent.getMetrics();
+      expect(metrics.uptime).toBeGreaterThan(0);
+      await agent.stop();
+    });
+
+    it('should calculate average execution time', async () => {
+      agent.runOnceResult = agent.testCreateTaskResult('test', 'completed');
+      await agent.start();
+      await agent.stop();
+      const metrics = agent.getMetrics();
+      expect(metrics.averageExecutionMs).toBeGreaterThanOrEqual(0);
+    });
+  });
+
+  describe('Task Queue', () => {
+    it('should add tasks with unique IDs', () => {
+      const task1 = agent.testAddTask('type1', { key: 'value1' });
+      const task2 = agent.testAddTask('type2', { key: 'value2' });
+      expect(task1.id).not.toBe(task2.id);
+    });
+
+    it('should set correct task properties', () => {
+      const task = agent.testAddTask('test-type', { data: 'value' });
+      expect(task.type).toBe('test-type');
+      expect(task.payload).toEqual({ data: 'value' });
+      expect(task.status).toBe('pending');
+      expect(task.agentId).toBe('test-agent');
+    });
+  });
+
+  describe('Task Results', () => {
+    it('should create completed task result', () => {
+      const result = agent.testCreateTaskResult('scan', 'completed', { count: 10 });
+      expect(result.status).toBe('completed');
+      expect(result.result).toEqual({ count: 10 });
+    });
+
+    it('should create failed task result', () => {
+      const result = agent.testCreateTaskResult('scan', 'failed', null);
+      expect(result.status).toBe('failed');
+    });
+  });
+});

__tests__/unit/agents/PlantLineageAgent.test.ts

@@ -0,0 +1,241 @@
+/**
+ * PlantLineageAgent Tests
+ * Tests for the plant lineage tracking agent
+ */
+
+import { PlantLineageAgent, getPlantLineageAgent } from '../../../lib/agents/PlantLineageAgent';
+
+// Mock the blockchain manager
+jest.mock('../../../lib/blockchain/manager', () => ({
+  getBlockchain: jest.fn(() => ({
+    getChain: jest.fn(() => [
+      // Genesis block
+      {
+        index: 0,
+        timestamp: '2024-01-01T00:00:00Z',
+        plant: { id: 'genesis' },
+        previousHash: '0',
+        hash: 'genesis-hash',
+        nonce: 0,
+      },
+      // First generation plant
+      {
+        index: 1,
+        timestamp: '2024-01-02T00:00:00Z',
+        plant: {
+          id: 'plant-1',
+          name: 'Original Tomato',
+          species: 'Tomato',
+          variety: 'Cherry',
+          generation: 1,
+          propagationType: 'original',
+          parentPlantId: undefined,
+          childPlants: ['plant-2'],
+          status: 'thriving',
+          dateAcquired: '2024-01-02',
+          location: { latitude: 40.7128, longitude: -74.006 },
+          environment: { light: 'full_sun' },
+          growthMetrics: { height: 50 },
+        },
+        previousHash: 'genesis-hash',
+        hash: 'hash-1',
+        nonce: 1,
+      },
+      // Second generation plant
+      {
+        index: 2,
+        timestamp: '2024-01-15T00:00:00Z',
+        plant: {
+          id: 'plant-2',
+          name: 'Cloned Tomato',
+          species: 'Tomato',
+          variety: 'Cherry',
+          generation: 2,
+          propagationType: 'cutting',
+          parentPlantId: 'plant-1',
+          childPlants: ['plant-3'],
+          status: 'healthy',
+          dateAcquired: '2024-01-15',
+          location: { latitude: 40.73, longitude: -73.99 },
+          environment: { light: 'partial_sun' },
+          growthMetrics: { height: 30 },
+        },
+        previousHash: 'hash-1',
+        hash: 'hash-2',
+        nonce: 2,
+      },
+      // Third generation plant
+      {
+        index: 3,
+        timestamp: '2024-02-01T00:00:00Z',
+        plant: {
+          id: 'plant-3',
+          name: 'Third Gen Tomato',
+          species: 'Tomato',
+          variety: 'Cherry',
+          generation: 3,
+          propagationType: 'seed',
+          parentPlantId: 'plant-2',
+          childPlants: [],
+          status: 'healthy',
+          dateAcquired: '2024-02-01',
+          location: { latitude: 40.75, longitude: -73.98 },
+          environment: { light: 'full_sun' },
+          growthMetrics: { height: 20 },
+        },
+        previousHash: 'hash-2',
+        hash: 'hash-3',
+        nonce: 3,
+      },
+    ]),
+  })),
+}));
+
+describe('PlantLineageAgent', () => {
+  let agent: PlantLineageAgent;
+
+  beforeEach(() => {
+    agent = new PlantLineageAgent();
+  });
+
+  afterEach(async () => {
+    if (agent.status === 'running') {
+      await agent.stop();
+    }
+  });
+
+  describe('Initialization', () => {
+    it('should initialize with correct config', () => {
+      expect(agent.config.id).toBe('plant-lineage-agent');
+      expect(agent.config.name).toBe('Plant Lineage Agent');
+      expect(agent.config.priority).toBe('high');
+      expect(agent.config.intervalMs).toBe(60000);
+    });
+
+    it('should start in idle status', () => {
+      expect(agent.status).toBe('idle');
+    });
+  });
+
+  describe('runOnce', () => {
+    it('should complete a scan cycle', async () => {
+      const result = await agent.runOnce();
+      expect(result).not.toBeNull();
+      expect(result?.status).toBe('completed');
+      expect(result?.type).toBe('lineage_scan');
+    });
+
+    it('should scan plants and update cache', async () => {
+      await agent.runOnce();
+      expect(agent.getLineageAnalysis('plant-1')).not.toBeNull();
+      expect(agent.getLineageAnalysis('plant-2')).not.toBeNull();
+      expect(agent.getLineageAnalysis('plant-3')).not.toBeNull();
+    });
+
+    it('should return scan statistics', async () => {
+      const result = await agent.runOnce();
+      expect(result?.result).toHaveProperty('plantsScanned');
+      expect(result?.result).toHaveProperty('anomaliesFound');
+      expect(result?.result).toHaveProperty('cacheSize');
+      expect(result?.result.plantsScanned).toBe(3);
+    });
+  });
+
+  describe('Lineage Analysis', () => {
+    beforeEach(async () => {
+      await agent.runOnce();
+    });
+
+    it('should find ancestors correctly', () => {
+      const analysis = agent.getLineageAnalysis('plant-3');
+      expect(analysis?.ancestors).toContain('plant-2');
+      expect(analysis?.ancestors).toContain('plant-1');
+      expect(analysis?.ancestors.length).toBe(2);
+    });
+
+    it('should find descendants correctly', () => {
+      const analysis = agent.getLineageAnalysis('plant-1');
+      expect(analysis?.descendants).toContain('plant-2');
+      expect(analysis?.descendants).toContain('plant-3');
+    });
+
+    it('should track generation depth', () => {
+      const analysis1 = agent.getLineageAnalysis('plant-1');
+      const analysis3 = agent.getLineageAnalysis('plant-3');
+      expect(analysis1?.generation).toBe(1);
+      expect(analysis3?.generation).toBe(3);
+    });
+
+    it('should calculate lineage size', () => {
+      const analysis = agent.getLineageAnalysis('plant-2');
+      // plant-2 has 1 ancestor (plant-1) and 1 descendant (plant-3) + itself = 3
+      expect(analysis?.totalLineageSize).toBe(3);
+    });
+
+    it('should build propagation chain', () => {
+      const analysis = agent.getLineageAnalysis('plant-3');
+      expect(analysis?.propagationChain).toEqual(['original', 'cutting', 'seed']);
+    });
+
+    it('should calculate health score', () => {
+      const analysis = agent.getLineageAnalysis('plant-1');
+      expect(analysis?.healthScore).toBeGreaterThan(0);
+      expect(analysis?.healthScore).toBeLessThanOrEqual(100);
+    });
+
+    it('should return null for non-existent plant', () => {
+      const analysis = agent.getLineageAnalysis('non-existent');
+      expect(analysis).toBeNull();
+    });
+  });
+
+  describe('Network Statistics', () => {
+    beforeEach(async () => {
+      await agent.runOnce();
+    });
+
+    it('should calculate total plants', () => {
+      const stats = agent.getNetworkStats();
+      expect(stats.totalPlants).toBe(3);
+    });
+
+    it('should calculate total lineages (root plants)', () => {
+      const stats = agent.getNetworkStats();
+      expect(stats.totalLineages).toBe(1); // Only plant-1 has no ancestors
+    });
+
+    it('should calculate average generation depth', () => {
+      const stats = agent.getNetworkStats();
+      // (1 + 2 + 3) / 3 = 2
+      expect(stats.avgGenerationDepth).toBe(2);
+    });
+
+    it('should return empty stats when no data', () => {
+      const emptyAgent = new PlantLineageAgent();
+      const stats = emptyAgent.getNetworkStats();
+      expect(stats.totalPlants).toBe(0);
+      expect(stats.totalLineages).toBe(0);
+    });
+  });
+
+  describe('Anomaly Detection', () => {
+    it('should return empty anomalies initially', () => {
+      expect(agent.getAnomalies()).toEqual([]);
+    });
+
+    it('should detect anomalies during scan', async () => {
+      await agent.runOnce();
+      const anomalies = agent.getAnomalies();
+      // The mock data is valid, so no anomalies should be detected
+      expect(Array.isArray(anomalies)).toBe(true);
+    });
+  });
+
+  describe('Singleton', () => {
+    it('should return same instance from getPlantLineageAgent', () => {
+      const agent1 = getPlantLineageAgent();
+      const agent2 = getPlantLineageAgent();
+      expect(agent1).toBe(agent2);
+    });
+  });
+});

__tests__/unit/blockchain/PlantChain.test.ts

@@ -0,0 +1,169 @@
+/**
+ * PlantChain Tests
+ * Tests for the blockchain implementation
+ */
+
+import { PlantChain } from '../../../lib/blockchain/PlantChain';
+import { PlantData } from '../../../lib/blockchain/types';
+
+describe('PlantChain', () => {
+  let chain: PlantChain;
+
+  beforeEach(() => {
+    chain = new PlantChain();
+  });
+
+  describe('Initialization', () => {
+    it('should create chain with genesis block', () => {
+      expect(chain.getChain().length).toBe(1);
+    });
+
+    it('should have valid genesis block', () => {
+      const genesisBlock = chain.getChain()[0];
+      expect(genesisBlock.index).toBe(0);
+      expect(genesisBlock.previousHash).toBe('0');
+    });
+  });
+
+  describe('Adding Plants', () => {
+    const createTestPlant = (overrides?: Partial<PlantData>): PlantData => ({
+      id: `plant-${Date.now()}`,
+      name: 'Test Plant',
+      species: 'Test Species',
+      variety: 'Test Variety',
+      generation: 1,
+      propagationType: 'original',
+      dateAcquired: new Date().toISOString(),
+      location: {
+        latitude: 40.7128,
+        longitude: -74.006,
+        city: 'New York',
+      },
+      status: 'healthy',
+      ...overrides,
+    });
+
+    it('should add new plant to chain', () => {
+      const plant = createTestPlant();
+      chain.addPlant(plant);
+      expect(chain.getChain().length).toBe(2);
+    });
+
+    it('should generate valid block hash', () => {
+      const plant = createTestPlant();
+      chain.addPlant(plant);
+      const newBlock = chain.getChain()[1];
+      expect(newBlock.hash).toBeDefined();
+      expect(newBlock.hash.length).toBeGreaterThan(0);
+    });
+
+    it('should link blocks correctly', () => {
+      const plant = createTestPlant();
+      chain.addPlant(plant);
+      const genesisBlock = chain.getChain()[0];
+      const newBlock = chain.getChain()[1];
+      expect(newBlock.previousHash).toBe(genesisBlock.hash);
+    });
+
+    it('should store plant data correctly', () => {
+      const plant = createTestPlant({ name: 'My Tomato' });
+      chain.addPlant(plant);
+      const newBlock = chain.getChain()[1];
+      expect(newBlock.plant.name).toBe('My Tomato');
+    });
+
+    it('should add multiple plants', () => {
+      chain.addPlant(createTestPlant({ id: 'plant-1' }));
+      chain.addPlant(createTestPlant({ id: 'plant-2' }));
+      chain.addPlant(createTestPlant({ id: 'plant-3' }));
+      expect(chain.getChain().length).toBe(4);
+    });
+  });
+
+  describe('Finding Plants', () => {
+    beforeEach(() => {
+      chain.addPlant({
+        id: 'tomato-1',
+        name: 'Cherry Tomato',
+        species: 'Tomato',
+        variety: 'Cherry',
+        generation: 1,
+        propagationType: 'original',
+        dateAcquired: new Date().toISOString(),
+        location: { latitude: 40.7, longitude: -74.0 },
+        status: 'healthy',
+      });
+      chain.addPlant({
+        id: 'basil-1',
+        name: 'Sweet Basil',
+        species: 'Basil',
+        variety: 'Genovese',
+        generation: 1,
+        propagationType: 'seed',
+        dateAcquired: new Date().toISOString(),
+        location: { latitude: 40.8, longitude: -73.9 },
+        status: 'thriving',
+      });
+    });
+
+    it('should find plant by ID', () => {
+      const block = chain.findPlant('tomato-1');
+      expect(block).toBeDefined();
+      expect(block?.plant.name).toBe('Cherry Tomato');
+    });
+
+    it('should return undefined for non-existent plant', () => {
+      const block = chain.findPlant('non-existent');
+      expect(block).toBeUndefined();
+    });
+  });
+
+  describe('Chain Validation', () => {
+    it('should validate empty chain (genesis only)', () => {
+      expect(chain.isValid()).toBe(true);
+    });
+
+    it('should validate chain with plants', () => {
+      chain.addPlant({
+        id: 'plant-1',
+        name: 'Test Plant',
+        species: 'Test',
+        variety: 'Test',
+        generation: 1,
+        propagationType: 'original',
+        dateAcquired: new Date().toISOString(),
+        location: { latitude: 40.7, longitude: -74.0 },
+        status: 'healthy',
+      });
+      expect(chain.isValid()).toBe(true);
+    });
+  });
+
+  describe('Serialization', () => {
+    beforeEach(() => {
+      chain.addPlant({
+        id: 'plant-1',
+        name: 'Test Plant',
+        species: 'Test',
+        variety: 'Test',
+        generation: 1,
+        propagationType: 'original',
+        dateAcquired: new Date().toISOString(),
+        location: { latitude: 40.7, longitude: -74.0 },
+        status: 'healthy',
+      });
+    });
+
+    it('should export to JSON', () => {
+      const json = chain.toJSON();
+      expect(json).toBeDefined();
+      expect(Array.isArray(json)).toBe(true);
+    });
+
+    it('should import from JSON', () => {
+      const json = chain.toJSON();
+      const restored = PlantChain.fromJSON(json);
+      expect(restored.getChain().length).toBe(chain.getChain().length);
+    });
+  });
+});

commitlint.config.js

@@ -0,0 +1,25 @@
+module.exports = {
+  extends: ['@commitlint/config-conventional'],
+  rules: {
+    'type-enum': [
+      2,
+      'always',
+      [
+        'feat',     // New feature
+        'fix',      // Bug fix
+        'docs',     // Documentation
+        'style',    // Code style (formatting, semicolons, etc.)
+        'refactor', // Code refactoring
+        'perf',     // Performance improvement
+        'test',     // Adding or updating tests
+        'build',    // Build system or dependencies
+        'ci',       // CI configuration
+        'chore',    // Maintenance tasks
+        'revert',   // Revert a previous commit
+      ],
+    ],
+    'subject-case': [2, 'always', 'lower-case'],
+    'subject-max-length': [2, 'always', 72],
+    'body-max-line-length': [2, 'always', 100],
+  },
+};

cypress.config.ts

@@ -0,0 +1,35 @@
+import { defineConfig } from 'cypress';
+
+export default defineConfig({
+  e2e: {
+    baseUrl: 'http://localhost:3001',
+    supportFile: 'cypress/support/e2e.ts',
+    specPattern: 'cypress/e2e/**/*.cy.{ts,tsx}',
+    viewportWidth: 1280,
+    viewportHeight: 720,
+    video: true,
+    screenshotOnRunFailure: true,
+    defaultCommandTimeout: 10000,
+    requestTimeout: 10000,
+    responseTimeout: 30000,
+    retries: {
+      runMode: 2,
+      openMode: 0,
+    },
+    setupNodeEvents(on, config) {
+      // implement node event listeners here
+      on('task', {
+        log(message) {
+          console.log(message);
+          return null;
+        },
+      });
+    },
+  },
+  component: {
+    devServer: {
+      framework: 'next',
+      bundler: 'webpack',
+    },
+  },
+});

cypress/e2e/home.cy.ts

@@ -0,0 +1,32 @@
+/**
+ * Home Page E2E Tests
+ */
+
+describe('Home Page', () => {
+  beforeEach(() => {
+    cy.visit('/');
+    cy.waitForPageLoad();
+  });
+
+  it('should load the home page', () => {
+    cy.url().should('eq', `${Cypress.config('baseUrl')}/`);
+  });
+
+  it('should display the main navigation', () => {
+    cy.get('nav').should('be.visible');
+  });
+
+  it('should have proper page title', () => {
+    cy.title().should('not.be.empty');
+  });
+
+  it('should be responsive on mobile viewport', () => {
+    cy.viewport('iphone-x');
+    cy.get('nav').should('be.visible');
+  });
+
+  it('should be responsive on tablet viewport', () => {
+    cy.viewport('ipad-2');
+    cy.get('nav').should('be.visible');
+  });
+});

cypress/e2e/plant-registration.cy.ts

@@ -0,0 +1,51 @@
+/**
+ * Plant Registration E2E Tests
+ */
+
+describe('Plant Registration', () => {
+  beforeEach(() => {
+    cy.visit('/plants/register');
+    cy.waitForPageLoad();
+  });
+
+  it('should load the registration page', () => {
+    cy.url().should('include', '/plants/register');
+  });
+
+  it('should display registration form', () => {
+    cy.get('form').should('be.visible');
+  });
+
+  it('should have required form fields', () => {
+    // Check for common form fields
+    cy.get('input, select, textarea').should('have.length.at.least', 1);
+  });
+
+  it('should show validation errors for empty form submission', () => {
+    // Try to submit empty form
+    cy.get('form').within(() => {
+      cy.get('button[type="submit"]').click();
+    });
+    // Form should not navigate away without valid data
+    cy.url().should('include', '/plants/register');
+  });
+
+  describe('Form Validation', () => {
+    it('should require plant name', () => {
+      cy.get('input[name="name"]').should('exist');
+    });
+
+    it('should require plant species', () => {
+      cy.get('input[name="species"], select[name="species"]').should('exist');
+    });
+  });
+
+  describe('Anonymous Registration', () => {
+    it('should allow anonymous registration', () => {
+      cy.visit('/plants/register-anonymous');
+      cy.waitForPageLoad();
+      cy.url().should('include', '/plants/register-anonymous');
+      cy.get('form').should('be.visible');
+    });
+  });
+});

cypress/e2e/transparency.cy.ts

@@ -0,0 +1,49 @@
+/**
+ * Transparency Dashboard E2E Tests
+ */
+
+describe('Transparency Dashboard', () => {
+  beforeEach(() => {
+    cy.visit('/transparency');
+    cy.waitForPageLoad();
+  });
+
+  it('should load the transparency page', () => {
+    cy.url().should('include', '/transparency');
+  });
+
+  it('should display dashboard content', () => {
+    cy.get('main').should('be.visible');
+  });
+
+  it('should show transparency metrics', () => {
+    // Check for dashboard sections
+    cy.get('[data-testid="dashboard"], .dashboard, main').should('be.visible');
+  });
+
+  describe('Data Display', () => {
+    it('should display charts or data visualizations', () => {
+      // Look for chart containers or data elements
+      cy.get('canvas, svg, [class*="chart"], [class*="graph"]').should(
+        'have.length.at.least',
+        0
+      );
+    });
+
+    it('should display audit information', () => {
+      // Check for audit-related content
+      cy.contains(/audit|log|record|history/i).should('exist');
+    });
+  });
+
+  describe('Accessibility', () => {
+    it('should have proper heading structure', () => {
+      cy.get('h1, h2, h3').should('have.length.at.least', 1);
+    });
+
+    it('should be keyboard navigable', () => {
+      cy.get('body').tab();
+      cy.focused().should('exist');
+    });
+  });
+});

cypress/e2e/vertical-farm.cy.ts

@@ -0,0 +1,59 @@
+/**
+ * Vertical Farm E2E Tests
+ */
+
+describe('Vertical Farm', () => {
+  describe('Farm List Page', () => {
+    beforeEach(() => {
+      cy.visit('/vertical-farm');
+      cy.waitForPageLoad();
+    });
+
+    it('should load the vertical farm page', () => {
+      cy.url().should('include', '/vertical-farm');
+    });
+
+    it('should display farm management content', () => {
+      cy.get('main').should('be.visible');
+    });
+
+    it('should have navigation to register new farm', () => {
+      cy.contains(/register|new|add|create/i).should('exist');
+    });
+  });
+
+  describe('Farm Registration', () => {
+    beforeEach(() => {
+      cy.visit('/vertical-farm/register');
+      cy.waitForPageLoad();
+    });
+
+    it('should load the registration page', () => {
+      cy.url().should('include', '/vertical-farm/register');
+    });
+
+    it('should display registration form', () => {
+      cy.get('form').should('be.visible');
+    });
+
+    it('should have required form fields', () => {
+      cy.get('input, select, textarea').should('have.length.at.least', 1);
+    });
+  });
+
+  describe('Responsiveness', () => {
+    it('should display correctly on mobile', () => {
+      cy.viewport('iphone-x');
+      cy.visit('/vertical-farm');
+      cy.waitForPageLoad();
+      cy.get('main').should('be.visible');
+    });
+
+    it('should display correctly on tablet', () => {
+      cy.viewport('ipad-2');
+      cy.visit('/vertical-farm');
+      cy.waitForPageLoad();
+      cy.get('main').should('be.visible');
+    });
+  });
+});

cypress/fixtures/example.json

@@ -1,5 +1,25 @@
 {
-  "name": "Using fixtures to represent data",
-  "email": "hello@cypress.io",
-  "body": "Fixtures are a great way to mock data for responses to routes"
+  "plants": [
+    {
+      "id": "plant-1",
+      "name": "Cherry Tomato",
+      "species": "Tomato",
+      "variety": "Cherry",
+      "generation": 1,
+      "status": "healthy"
+    },
+    {
+      "id": "plant-2",
+      "name": "Sweet Basil",
+      "species": "Basil",
+      "variety": "Genovese",
+      "generation": 1,
+      "status": "thriving"
+    }
+  ],
+  "user": {
+    "id": "user-1",
+    "email": "test@example.com",
+    "name": "Test User"
+  }
 }

cypress/support/commands.ts

@@ -0,0 +1,27 @@
+/**
+ * Cypress Custom Commands
+ */
+
+// Wait for page to fully load
+Cypress.Commands.add('waitForPageLoad', () => {
+  cy.document().its('readyState').should('eq', 'complete');
+});
+
+// Login command (placeholder for auth implementation)
+Cypress.Commands.add('login', (email: string, password: string) => {
+  // This will be implemented when auth is added
+  cy.log(`Login with ${email}`);
+  cy.session([email, password], () => {
+    // Placeholder for auth session
+    cy.visit('/');
+  });
+});
+
+// Navigate to a plant page
+Cypress.Commands.add('visitPlant', (plantId: string) => {
+  cy.visit(`/plants/${plantId}`);
+  cy.waitForPageLoad();
+});
+
+// Export empty object for module
+export {};

cypress/support/e2e.ts

@@ -0,0 +1,45 @@
+/**
+ * Cypress E2E Support File
+ * This file is processed and loaded automatically before test files.
+ */
+
+// Import commands
+import './commands';
+
+// Global hooks
+beforeEach(() => {
+  // Clear local storage between tests
+  cy.clearLocalStorage();
+});
+
+// Handle uncaught exceptions
+Cypress.on('uncaught:exception', (err, runnable) => {
+  // Returning false prevents Cypress from failing the test
+  // This is useful for third-party scripts that may throw errors
+  if (err.message.includes('ResizeObserver loop')) {
+    return false;
+  }
+  return true;
+});
+
+// Add custom assertions if needed
+declare global {
+  namespace Cypress {
+    interface Chainable {
+      /**
+       * Custom command to wait for page load
+       */
+      waitForPageLoad(): Chainable<void>;
+
+      /**
+       * Custom command to login (placeholder for auth tests)
+       */
+      login(email: string, password: string): Chainable<void>;
+
+      /**
+       * Custom command to navigate to a plant page
+       */
+      visitPlant(plantId: string): Chainable<void>;
+    }
+  }
+}

jest.config.js

@@ -8,14 +8,20 @@ const config = {
     '^@/(.*)$': '<rootDir>/$1',
   },
   transform: {
-    '^.+\\.tsx?$': ['ts-jest', {
-      tsconfig: 'tsconfig.json',
-    }],
+    '^.+\\.tsx?$': [
+      'ts-jest',
+      {
+        tsconfig: 'tsconfig.json',
+      },
+    ],
   },
   collectCoverageFrom: [
     'lib/**/*.ts',
     '!lib/**/*.d.ts',
+    '!lib/**/types.ts',
   ],
+  coverageDirectory: 'coverage',
+  coverageReporters: ['text', 'lcov', 'html', 'json-summary'],
   coverageThreshold: {
     global: {
       branches: 80,
@@ -24,8 +30,11 @@ const config = {
       statements: 80,
     },
   },
-  setupFilesAfterEnv: [],
+  setupFilesAfterEnv: ['<rootDir>/__tests__/setup.ts'],
+  testPathIgnorePatterns: ['/node_modules/', '/.next/', '/cypress/'],
   verbose: true,
+  // Increase timeout for async tests
+  testTimeout: 10000,
 };
 
 module.exports = config;

package.json

@@ -9,9 +9,14 @@
     "start": "next start -p 3001",
     "preview": "bun run build && bun run start",
     "lint": "next lint",
+    "lint:fix": "next lint --fix",
+    "format": "prettier --write .",
+    "format:check": "prettier --check .",
+    "type-check": "tsc --noEmit",
     "test": "jest",
     "test:watch": "jest --watch",
     "test:coverage": "jest --coverage",
+    "test:ci": "jest --ci --coverage --reporters=default --reporters=jest-junit",
     "cy:open": "cypress open",
     "cy:run": "cypress run",
     "test:e2e": "start-server-and-test 'bun run preview' http://localhost:3001 cy:open",
@@ -21,7 +26,9 @@
     "db:migrate": "prisma migrate dev",
     "db:migrate:prod": "prisma migrate deploy",
     "db:seed": "bun run prisma/seed.ts",
-    "db:studio": "prisma studio"
+    "db:studio": "prisma studio",
+    "prepare": "husky install",
+    "validate": "bun run type-check && bun run lint && bun run test"
   },
   "dependencies": {
     "@next-auth/prisma-adapter": "^1.0.7",
@@ -44,17 +51,34 @@
   },
   "devDependencies": {
     "@babel/core": "^7.12.9",
+    "@commitlint/cli": "^18.4.3",
+    "@commitlint/config-conventional": "^18.4.3",
     "@types/bcryptjs": "^3.0.0",
     "@types/jest": "^29.5.0",
     "@types/node": "^17.0.21",
     "@types/react": "^17.0.0",
     "autoprefixer": "^10.4.2",
+    "cypress": "^13.6.0",
     "eslint-config-next": "^12.0.10",
+    "husky": "^8.0.3",
     "jest": "^29.5.0",
+    "jest-junit": "^16.0.0",
+    "lint-staged": "^15.2.0",
     "postcss": "^8.4.5",
+    "prettier": "^3.1.0",
     "prisma": "^5.7.0",
+    "start-server-and-test": "^2.0.3",
     "tailwindcss": "^3.0.15",
     "ts-jest": "^29.1.0",
     "typescript": "^4.5.5"
+  },
+  "lint-staged": {
+    "*.{ts,tsx}": [
+      "eslint --fix",
+      "prettier --write"
+    ],
+    "*.{json,md,css}": [
+      "prettier --write"
+    ]
   }
 }